rs255278351 SNP Detail

Summary

• ID
  rs255278351
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132651208 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ataataaat aaatcttGGG GCTGGAGCCA
  GCAAGGCTGG AGCCAGcaga ggtcctgagt tcaattccca gcaaccacat gaaggctcag
  aaccatctgt tcagctacag tgtaccccta tacataaaat aaataaataa atcttttttt
  W
  aaaatgtgtt tgtgagtgtg catgcctctg tgtatgtgtg tgtgtgtgaa tgcagtgcct
  atcaaggcta gatggagtcc cccagggctg gagttgcagg cagttttaaa ctgtctgaca
  tgaatactgt acaaacagta tgtaatctta                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337438	CHEV_4_132479812	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255278351					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132651208 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14977	CpG island 14977	687 bp distal
Fam76a	family with sequence similarity 76, member A	1359 bp upstream
Gm69717	predicted gene, 69717	within coordinates
Rr398546	regulatory region 398546	917 bp downstream
Rr601111	regulatory region 601111	1415 bp distal
Rr601112	regulatory region 601112	849 bp distal
Rr601113	regulatory region 601113	1374 bp distal
Rr601114	regulatory region 601114	1148 bp distal
Tssr43727	transcription start site region 43727	1353 bp upstream
Tssr43728	transcription start site region 43728	1334 bp upstream
Tssr43729	transcription start site region 43729	1296 bp upstream
Tssr43730	transcription start site region 43730	1284 bp upstream
Tssr43731	transcription start site region 43731	1271 bp upstream
Tssr43732	transcription start site region 43732	1266 bp upstream