rs255224053 SNP Detail

Summary

• ID
  rs255224053
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98692215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGAGCCA TGCTAACAAT
  GTAGGCAAGG ACAAGCAAGT AGCTGTGGCG TGTGACATCT GAGGTCTGTT GACTGGCCAC
  CCTACCCAAG GCTCTCATTA AAATGGGGTC CCAAAGCTTT CCAACACTCA TGAGTTTTCT
  TGGTTTAATA GTGAACGCCC TTAACTCTCC TCCGGCTTCC TGTGCCTATG GCACTAGAAC
  R
  AGGCTCAATA AAATGCTCCA CAGGTGGGCT TCAAAGGCTT AACATGAAAC ATTAACACAA
  GCCCCTCATT CTCTCTCTTA ATATTGAGTA CACGTTAAAT CACTGTGGGT ATACTGGGCT
  AAATATATTC ACAATTAATT CTACCTGTTG TTATTTTGTG TTCCGTTAAC TGCTTCGAAT
  GAGACCCAAA CTGTATTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321221729	CHEV_4_98470669	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255224053					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98692215 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kank4	KN motif and ankyrin repeat domains 4			Intron
				Noncoding-Transcript-Variant
Rr595790	regulatory region 595790			1923 bp distal
Rr595791	regulatory region 595791			67 bp proximal
Rr595792	regulatory region 595792			1226 bp proximal