rs255142541 SNP Detail

Summary

• ID
  rs255142541
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150115875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAG TACTTGGGTC CAGGTCTGCA
  Y
  TGGGGGGTGA TGTCACAAAG GGCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321427691	CHEV_4_149405527	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255142541					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150115875 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15342	CpG island 15342	429 bp distal
Cpgi15343	CpG island 15343	1920 bp proximal
Gm70249	predicted gene, 70249	within coordinates
Rr605147	regulatory region 605147	1591 bp distal
Rr605148	regulatory region 605148	within coordinates
Rr605149	regulatory region 605149	1626 bp proximal
Tssr40361	transcription start site region 40361	1568 bp downstream