rs255099605 SNP Detail

Summary

• ID
  rs255099605
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:132738767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCAC AGCGCGCGGA GCGGCCGAAC
  R
  GGGACTACAA GTCCCGGCGT GCTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321338142	CHEV_4_132567371	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255099605					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132738767 () rs orientation: forward

Symbol	Name	Function Class
Ahdc1	AT hook, DNA binding motif, containing 1	Noncoding-Transcript-Variant
Cpgi14982	CpG island 14982	within coordinates
Rr601152	regulatory region 601152	1441 bp distal
Rr601154	regulatory region 601154	within coordinates
Rr601155	regulatory region 601155	213 bp proximal
Rr601156	regulatory region 601156	258 bp proximal
Rr601157	regulatory region 601157	759 bp proximal
Tssr39436	transcription start site region 39436	27 bp upstream
Tssr39437	transcription start site region 39437	62 bp upstream
Tssr39438	transcription start site region 39438	338 bp upstream