rs254974992 SNP Detail

Summary

• ID
  rs254974992
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151876553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATTCACA TAAAATTTGC
  CAGGAGTGGT GGGAAATTGA GAATTGACAT GTGGAGTAAA GGGGACAAAG ATGGGATATG
  AAGCCTGCAG ATCAGTAAGG GAAAGAGATG CCTGGGAGTC TACTGCACGA CTACTCTCTG
  TCTGGCTTGG TGCTCACTGT TTCATATGCA ACACCTCTGC CTCGACTTGG AGGAAGTGCC
  C
  TGTTGTGAAG TTCTAATTAC TATGCCTCTC CAAGGTTATG ACAAATGAAA CATTACAGAG
  GCAAGAACAA ATCTGAATGC TAAGCAACTC TAAAAACGTG TGTGTGTGTA TGTGTGTGTA
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTATGGGGG GGTATGCGTG
  CGAGGATCTC AGTCATCAGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321028296	CHEV_3_151833880	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254974992					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151876553 () rs orientation: forward

Symbol	Name	Function Class
Gm64603	predicted gene, 64603	within coordinates
Gm64610	predicted gene, 64610	within coordinates
Rr587476	regulatory region 587476	within coordinates
Rr587477	regulatory region 587477	1051 bp proximal