rs254782981 SNP Detail

Summary

• ID
  rs254782981
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153664760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTCCCCC AGCCCTGGAT TGTGAGTACG
  TGcacacaca cacacacaca cacacacaca cacacatact catacacacc catgtcacac
  acatgtgcat acacacagac acacacacaa gaacatacac acagacacac tcacacatgt
  A
  catacacaca cagtcacaca cacacacact cacatagact ctctcagaca cacacaatac
  acacacacac acacacatat acacgggcac actcatgcac acccatgcca cacacatgtg
  catacataca cacacacatg agtatacaca                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321031957	CHEV_3_153622087	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254782981					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153664760 () rs orientation: forward

Symbol	Name	Function Class
Gm64825	predicted gene, 64825	775 bp upstream
Rr398135	regulatory region 398135	834 bp downstream
Rr587804	regulatory region 587804	285 bp proximal
Rr587805	regulatory region 587805	462 bp proximal
Rr587806	regulatory region 587806	786 bp proximal
Tssr32440	transcription start site region 32440	718 bp downstream