rs254772863 SNP Detail

Summary

• ID
  rs254772863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105175026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAAGCAT TTTTTATTAG
  ATATTTTCTT TATTTACATT TCAAATGTTA TCCCCTTCCC TAGTTCCCCT CAGAAAATTC
  TCTATCTCCT CCCCCTCCGC CTGCTCCCCA ACCTACCCAC TCCTGCTTCT TGGCCCTAGC
  ATTCCCCTAT ACTGGGGCAT AGAGCCTTCA CAGGACCAAG GGCCTCTCCT CCCATTGATG
  R
  CTGACTAGGC CATCCTCTGC TACATATGCA GCTAGAGCCA TGAGACCCAC CATGTGTTTT
  CTTTGATTGG TGGTTTAGTT CCAAGAAGCT CTGGAGGTAC TGGTTAGTTC ATATTGTTGT
  TCCTCCTATG GGGCTGCAAA CCCCTTTAGC TCTTTGGGTA CTTTCTCTAG CTCTTTCGTT
  GGGGACCCTG TGCTCTGTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243604	CHEV_4_104990434	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254772863					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105175026 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596596	regulatory region 596596	645 bp distal
Rr596597	regulatory region 596597	749 bp distal