rs254686346 SNP Detail

Summary

• ID
  rs254686346
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103048498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggggatatg agcttggtta gagaggAgga
  ctggaaatat ggtctaatga caaagaacag ttgttggtct tttagaagac ctgagtttga
  ttgccTTCAG GGAATCTGGC ACTCTCTTCC AGCCACTATG AGTATTTCCC ACACATGGTA
  C
  acacacacac acacacacac acacacacac acacacacac acacacGAAT AAAGCTAAAT
  AAATTTGTAA AGAAAGAAAT TAGGAGTAGG GTGTGGAAGG AAAGAGTGGG TGAATATAAT
  CAAAATAAAT CCTATGTATA TATGAAATTG                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321236101	CHEV_4_102863906	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254686346					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103048498 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr596372	regulatory region 596372			1588 bp distal
Rr596373	regulatory region 596373			1314 bp proximal
Rr596374	regulatory region 596374			1321 bp proximal
Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1			Intron
				Noncoding-Transcript-Variant