rs254655814 SNP Detail

Summary

• ID
  rs254655814
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104195499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTGCCCTG TCCCATCTGG
  GTTTCTCCTG AAGAGGCAGC AGAAACTGTA GAAATTCTAC ATCTGTATAT TCCACTACAT
  TTCTCCTAGT GAACAAGAGG AATGTTTGTA CAAGATACAA ACCACTCTTA ATTATCTAAC
  AAAAAGCAGG CTGGGTTTCC TCTCTACCAG GCAAACCACT GGAATTTGCA ATGCAAATAA
  W
  TCTTGGGGTT TTCTTACATA AAGGCTGAAG CAAACTTGGG CTGACAAAAG CAGAAAGTTT
  TCAGAGAAGT CATGGTGCTT TTTGGGCAGT GGGTTCAAGA CTCCCTAAGA AAAGCAGGAG
  AACCCCTGGG AGCTCCCAGA CACTGAGCTA CCAATCAAAG AGCATACACA GGCTGGTCCA
  AGCCCCACCC CCAACACTTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320860095	CHEV_3_104092106	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254655814					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104195499 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	within coordinates
Rr582482	regulatory region 582482	889 bp proximal