rs254562302 SNP Detail

Summary

• ID
  rs254562302
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98110761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagttaaaa gtcaaaATAT TGCTAGAgtt
  tgatgtgaac tatcctccac aggttcatgt gtgtgactac ttagtccatc cactgaccat
  gtagtttggg gaggttATAG ATCTTCCCAC ATCCACTGTT ATGAGCATGG AGTATGGCCA
  R
  GATAACATAA GTGAATCCCT TAAGGGTAGG TCTTAAAGGT TATATGTGTT TTTAACTGAG
  Gtctctgtat cctggccacc aatatgtgag ccattctgac acaaccccac catcgtgaat
  tctggtgtga taggtttgaa cctgtgagcc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321220349	CHEV_4_97889215	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254562302					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98110761 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr378	regulatory region 378	within coordinates
Rr376892	regulatory region 376892	474 bp upstream
Rr595710	regulatory region 595710	386 bp distal
Rr595711	regulatory region 595711	815 bp proximal