rs254498970 SNP Detail

Summary

• ID
  rs254498970
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125642527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTGATTT CTGTTAGCAT
  ATGCACCTTT GAAGACAGGC TCTGGCAGTC TCCAGCATAG TCTTTTCTTG ACTAAAAGGT
  GTTCATAGTA CTAAATGAAT AAATTTGCTA AAAATATAGA TAATTTTGGT TTTTTGCAGG
  ATGCTAATGT TCAAAGATTT TATCTTATTT TATTTTCTGG TCAAGTAGTT TTATGTTAAA
  M
  ATACCTTAAA TGGGGAATAA AACCAAGATA GTTTCCTGCC ATTAATTGTA TGGAAATGGT
  TTGTTGGTAA TTTCAAATAA GAAAATGTGG GTACTGGCAC ATTTGTGTAA GTTGGGAAAT
  ATTATTCAGG GGGATTCAAC AAAATCAAGT TGGCTTGAAA GAGCACGGCA GAACCAAGCT
  TATTCTTAGA TTTTTATATC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320940424	CHEV_3_125551796	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254498970					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125642527 () rs orientation: forward

Symbol	Name	Function Class
Rr584614	regulatory region 584614	362 bp proximal
Rr584615	regulatory region 584615	462 bp proximal