rs254493232 SNP Detail

Summary

• ID
  rs254493232
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:62053781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCAGAAT TGGATGAGGA
  GCTTGGCCCC TCTGAGGAAA TAGACTCAGA GGAAGAGGCG GCTCGATATG AGGAAGAAAG
  ATACCATCCA GATGAAAGAT GAGCTAGTCA GTCACAGAAT AAGACAAAAG CAGCTAGAGA
  TAAAAGTCAG CTCGCTGCAC GGTGTCCCGG CCCTCAACCT CTGGGTCTTG GTGCACCTCC
  R
  CCCTATGTGG AGAGGTACCG TTCAGACTCA TTTATTCCAA AAGAGGAACA GAGAAAAGGG
  CAGCAAGCAT TTCCAGTCTT TGAAGGAGCC GATGGTGGAT GCGTTCATGC TCTGGTGGAG
  TATATACAGA TTAAAGAGCT TGCTGAGTCA GTCCGTAACT ATGGAGTCAA CACCAATTTT
  ACTATAGTGC AAGTCGAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321142265	CHEV_4_61796578	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254493232					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62053781 () rs orientation: forward

Symbol	Name	Function Class
Rr593247	regulatory region 593247	1493 bp distal
Rr593248	regulatory region 593248	1617 bp distal