rs254359636 SNP Detail

Summary

• ID
  rs254359636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152493095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCTGAGA TGCTCACAAC
  ACAGGCACTT CATCAACTCC CACAGTAGTG AAAGATGTGC ATTTTACAGA TGAGAGTGAA
  GACTCCAACC TCATGCAAAG TCACAGGCAA CAAATAATAT TAAAGACAAA AGAAGAAATG
  TCTGTTTCTT GTCAGGCATG ATGGTGGCGC ATGCCTTTAA TCCCAGCACT CAGGAGGCAG
  R
  GGCAGGCAGA TCTCTGTGAG TTCGAGGCCA GCCTGGTCTA AAAAGTGAGT TCCTGGGCAG
  CCAGGGCTTT TACAGAAAAA ACAAAGAAGA AAAAGAAAAA AAGAAAAAGA AATGTCTAAG
  TTAGACTAAA GAGTTCTAAC TAAGCCTCCT TCTCAGGTAG CTCATTCTCT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562881	CHEV_2_152476911	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254359636					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152493095 () rs orientation: forward

Symbol	Name	Function Class
1700030C14Rik	RIKEN cDNA 1700030C14 gene	1708 bp downstream
D2Ertd691e	DNA segment, Chr 2, ERATO Doi 691, expressed	59 bp distal
Rr374088	regulatory region 374088	922 bp upstream
Rr567410	regulatory region 567410	1677 bp proximal