rs254285284 SNP Detail

Summary

• ID
  rs254285284
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:6340441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGGATTC TTAAATCAGT
  GAGACCCTCT CAGTTCATCT GTGTCCTGTG AGTTGTTAAA TGGTGATTGG TTTGGTATAG
  ACTCATTACA GGTCTGAGCC TTTTGATATG CCCAGTGCTT CATAGTTGTT CTAGTTTCTT
  GCTTGTTTCT GTGGTAAAAT ATTTAAGAAA AGCAGCTCAG GAGAAAAGGG GTGTGCCTGG
  Y
  TCACAATTAT ACCTTAAAGT TCCTATAAGG AGATATGGCA GGAAAGTTAC AGCAGTGGGG
  ACTTGAGAGA CCTTCCTGAA TGCACACGCA AGAAAAACGA ATTAACATGC ACATACTTAG
  GGATTACCAA GCTTCTTTCT CAGCTGTCAT ACAGCCCAGG TCCTAGTCAC AACTAATGAC
  TTGCCACATC AATTAACTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324226955	CHEV_13_6289651	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254285284					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:6340441 () rs orientation: forward

Symbol	Name	Function Class
Gm35615	predicted gene, 35615	979 bp upstream
Rr474569	regulatory region 474569	1899 bp proximal