rs254264790 SNP Detail

Summary

• ID
  rs254264790
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115833888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTCAGTC ACAAAAAGAG
  TAAAATCTAT AACATGCAGC AGCATGGATG GACCTGGAGA GCACTGTGTT GGGTAAATAC
  ATCAGACACA GAATGACAGA TGTCACTTGC TCTCACTTGC ATGTATGTGT GCTAAAATTT
  AACTTTCTAT AGAATAGGAC AGTGGTTACC AAGGAGAAGG TTCAGGGAGG AAAGAATGAA
  K
  GGAGGGTATA GCTAGTTTGA GGTTTCTGGT GGGTGGACTG AATGATTTCT AGTGTTCTGT
  AGCCCAGTGG GGTAACTGTG GTGGAAAACA GCTAATTGAA TATTTCAAAA TAGCTAGTAG
  AGAGGATCTG AATGCTTTCA ATACAAAGAG ATGGTTAATT ACAGAAACAA TGGATAGGCT
  GATTGTCAAT CTCTGGTCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894113	CHEV_3_115743157	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254264790					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115833888 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	725 bp proximal