rs254096135 SNP Detail

Summary

• ID
  rs254096135
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73821893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCCCACT GACTCTTCCT
  CCAGGGGCTG TTGTCTCCTG GGCTCTGATC TGTGGATGCA GTAATGGGTA TCATAGCGAG
  TGCCACAGTA GCAACGCCAC ATACAGAGAC GAGGGATCAA GCTTACAGCT TGTGATGATT
  ATTTGCTAAA ACATTAGTCT AGGTGCTTAA TGTATTCATT TATATTTTTA TTTTCGACAT
  Y
  TGCATTTGGA GATTGGCTCC AAGGTTAAAG AAGAAGATAA CCCGTCTGGT AGGCCACCCC
  CTGGTTTTTA TTGCTGAATC TGCTCCTTCA TTTTCACCAG CTGGGTCATC TTTGCTCAGG
  GGAGACTCAC TTGGCTAAGG CTAGTCAGGA TACTGTTGTT TCCGAACAAT TAAAACACAA
  TCCGTACCTC CTCTAACCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320346300	CHEV_2_73829606	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254096135					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73821893 () rs orientation: forward

Symbol	Name	Function Class
Rr559269	regulatory region 559269	337 bp proximal