rs254071154 SNP Detail

Summary

• ID
  rs254071154
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148790655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAACTCAG TGGACTGAAG
  GGTTACAAGG ATGGTCACAG AGGCTGCTAC CAAGTGTGTG AGGGCATGGC CGGGCTGAAG
  AGGACCCTGC CAGGCACAGC TTGTCTCCGA GAGGACTGGG TAGCTTTATG TTGGCGTGAA
  GGGGAAGAGA AATGTGTTTT GGAAGATGAC ACACGAGGAA GCTGCCAGGG ATGGAGCAGA
  R
  AGACTACCTC AGGGACCCAA GTGCGGGGGT GGGAGGGGGT GGTGGTGGTG CTGCCTAAAG
  ACCTTCAAGT CCCTAGCTAG CTCAGTCACC AAACTAGGGC TCTGGAACTC TACGCTAGCT
  TCTCTCCCTG GTCACATCGC TTACTTCTGT GTGACCCAGA GTAAGTTACT GTCATTCTCT
  GAACCCCAAC TGTCAGAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321422327	CHEV_4_148080307	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254071154					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148790655 () rs orientation: forward

Symbol	Name	Function Class
Rr406288	regulatory region 406288	1927 bp proximal
Rr604736	regulatory region 604736	1044 bp distal
Rr604737	regulatory region 604737	1258 bp distal