rs254018133 SNP Detail

Summary

• ID
  rs254018133
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101295620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCTCTCC TGATTTCCCG
  TTCTTCCTAC AGAGGCATGC TGGCAATGAA TGCTGGCCCG GCTTGTCATA TTTTCAACTT
  GGTCTACATT ATAGGCATGT CATTTGTGAA AACATGTCTC TATAAGAGGA AGGAAAGTAA
  CTACTATACA AAGCTGATAT TAATCGGGTG TTTCCCACAT GCCAAATGCT AAAGATTTCA
  R
  TCTATTGTCT CCTGTGGCCA TGTGCCTGCT GTGCGTTGTC TTGTATTCAC TTCCCTTTTG
  TCAAAATATT GCCTGAGAAG ACATCTTCTT TGCAGTTTGT CCTCACTGAC CTGCCTCAGC
  TAAAAGAATG GGTCTTGACT GGCTTGGAGA CAGTGTAGAT TCCTCCCTGA GCACAGTAAC
  TGGGTCACAG TACAGATATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428380	CHEV_2_101305432	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254018133					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101295620 () rs orientation: forward

Symbol	Name	Function Class
Rr561501	regulatory region 561501	451 bp distal