rs253943133 SNP Detail

Summary

• ID
  rs253943133
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136798388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGTATTCTC ACCAGTCCAA GACTCCCCAC
  TCCCAGCGCT GCCACCCAAA CGCTAGTGTC TCTGAGTGCT TACTTGCTTT CTTCCCTCTA
  GACCTGTGGA GATAGGAACG GCACACCAAC CTTCTTCAGA TCCCGGGTAC CTAACTCCAC
  R
  TGGCTGTGGA AAGTTAAGGA TTGTGGAAGG GGAAAAAATC ACCTTCAAGT ACTACAATAA
  CAGAAAGGAA ATGGAAAATA TCAACTCTGT CCATGACTGC AGAAAAGGTA GAACTCCTTT
  AAACCCACCA GGGTAGTACA CATCAGGACA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321360816	CHEV_4_136626992	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253943133					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136798388 () rs orientation: forward

Symbol	Name	Function Class
Gm68277	predicted gene, 68277	within coordinates
Rr602532	regulatory region 602532	210 bp proximal
Rr602533	regulatory region 602533	1432 bp proximal
Rr602534	regulatory region 602534	1703 bp proximal