rs253914018 SNP Detail

Summary

• ID
  rs253914018
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:5992028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCAGTGG CCACGAGATC
  TGTGGCCTGA CACTTTCTCA ATGTAGCGAT TTGTACTGAG CCTGTCACTA GCTCAGCGGG
  AGGTAAAATT TACTTGACAG TGTTTCCTGG CTCTCTCCCA GCCTCAGCGT GAGTGCCAGT
  GAGTGCCGAG GGAGCGGGTG GGAGTGCTGA GTGAGTGGGT GGGTGCCAGG CCTGGGGAGT
  Y
  CTTAAGACCT GCAGCCCTGA GAGCGAGCAA GCCGAGCGGG AGATTGAAGG GCCCAGGGAG
  GCTTACAGAA GACTGGGGGC ACAGGTGCCA AGCAAGCATG CCCCCCCACC ACCACCACCA
  CCAGTCCTTG CCCTCCATCC TCTGTCTTCA GTAGGTAACT CTCAACATGC CTGGTCTCCA
  TGGCAATTGA CTCATCGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730831	CHEV_6_5942028	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253914018					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5992028 () rs orientation: forward

Symbol	Name	Function Class
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr626190	regulatory region 626190	within coordinates