rs253846306 SNP Detail

Summary

• ID
  rs253846306
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106103309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTTGTCG TCCAGCCCCT
  GGTCAATCAA TGGAGAACTG GCTGAGGGGA GGTGCCAGGG AGGAGAATCG TGAGCCTGTA
  GGCTCCTGTC CCTTTTGTTC TATCTCATAT CTGTTCCCAT TCCCCTCCTC TTCCTAGCTA
  TGAACATCAT ATCATTTACT TCAGAAGATC TATCTTTCCC AAATGGTCCA TCAGTGTGCC
  R
  CATGGAGGGG GGGGGGGGGA TCGCCAAAAT CAAGCTGTGC TGGCTTAAAC GCCCCACCAG
  ATTGGCCTAT GGTAATGATA CTTTTTTTCT GCTTGGTGAT TGATGTGGGA GGGCCAAAGC
  CTACCATCAG TGGTACCACT CCCACGGCAG GTGGTCCAGG GTGCTATAAG AAAACAGGCT
  GATGAAGGGG TCTGCAGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321245717	CHEV_4_105918717	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253846306					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106103309 () rs orientation: forward

Symbol	Name	Function Class
Gm12724	predicted gene 12724	within coordinates
Gm12729	predicted gene 12729	within coordinates
Rr596712	regulatory region 596712	777 bp proximal
Rr596713	regulatory region 596713	1760 bp proximal