rs253746788 SNP Detail

Summary

• ID
  rs253746788
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13286417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCTGTTT TGATCAGCTG
  CTATGTGGAG CTTCTCAGAG GACAGTTATG ATAGGTGCCT GTCTACAAGC ATAACAGAGT
  ATCATTAATA GTATCAAGGA TTGGTTCTTG CCTGTGAGAT GAGTCTCAAG TTGGGTCAGT
  CATTGGTTGG CCAATCCCTC AGACTCTGCT CCATGTTTAT CCTGCAAAGG TTTTGTGGAT
  K
  TGTTGTGGAG CCCTTATCTC TTCACTGGGA GTTCTGCGTG GCTACAGGAG GTGGCTACTT
  CAAGCTCCGT ATCTCCAACT ACTTGGAGTT TCAGCTAGAG TTATCCTCAT AGACACCCTG
  CAGCCTCCCC CATCCCACCC AGCATACTTG AGCTGAATCT TCTCCCCCCC CCCTCCTCCG
  CCTCACACAT GTGTAGCAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747516	CHEV_6_13236418	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253746788					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13286417 () rs orientation: forward

Symbol	Name	Function Class
Rr626565	regulatory region 626565	609 bp proximal