GCCGCGCCCC GCGCCCCCCC GGCCCCTCCC GCCTCCCCGC AGCTCCCTCC CCGCAACCCG CGGCGCGTGC GCAGGAGAGT TACGTGGGGC ATCCTCGGGC GCACCGACCC GGAGTTTGTT CGGCCTACCG GATCGGCGCT GTTTCGTCCG ACAGATCCAA AATGCCCAGA GCACCGGGCG CCCTCTCCGT GCTCCGCCCG K CGGGGCACCG CGCGCGTCCC CTGTGGAATT CCCGTACTAG GGCGTCGCGG GAGGCCGCTG CGGCGGTGAC GCCAGCAGAT CTCGGGGGCT CAGTGCTCCC GCTATGTCAC CGTCCGTGCC CTACCTAGGC AAGGTTCCAG TGGCTTCCCT TGGCAAGTGA GGCCCCAGAC TTTCGGGGCC TGCAGAGCAG AAAAAGACCA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320678396 | CHEV_3_19211732 | CHEVERUD | SCREENING_POP | f | SNP | T | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs253705120 | SNP | T | G |
Location: Chr3:19365896 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
3110037C07Rik | RIKEN cDNA 3110037C07 gene | Coding-Synonymous | ||||||
Cpgi13002 | CpG island 13002 | within coordinates | ||||||
Gm66414 | predicted gene, 66414 | within coordinates | ||||||
Pde7a | phosphodiesterase 7A | 410 bp upstream | ||||||
Rr573969 | regulatory region 573969 | 421 bp distal | ||||||
Rr573970 | regulatory region 573970 | 85 bp distal | ||||||
Rr573971 | regulatory region 573971 | within coordinates | ||||||
Tssr28510 | transcription start site region 28510 | 1027 bp downstream | ||||||
Tssr28511 | transcription start site region 28511 | 873 bp downstream | ||||||
Tssr28512 | transcription start site region 28512 | 259 bp downstream | ||||||
Tssr28513 | transcription start site region 28513 | 237 bp downstream | ||||||
Tssr32696 | transcription start site region 32696 | 469 bp upstream | ||||||
Tssr32697 | transcription start site region 32697 | 418 bp upstream | ||||||
Tssr32698 | transcription start site region 32698 | 388 bp upstream | ||||||
Tssr32699 | transcription start site region 32699 | 354 bp upstream | ||||||
Tssr32700 | transcription start site region 32700 | 329 bp upstream | ||||||
Tssr32701 | transcription start site region 32701 | 460 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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