rs253482908 SNP Detail

Summary

• ID
  rs253482908
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72283539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGA CCCGCCCTCC ATCCCCTCAC
  C
  CACACATGCC CACATTCTTA TTGTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321821410	CHEV_6_72256549	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253482908					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72283539 () rs orientation: forward

Symbol	Name	Function Class
Rr632126	regulatory region 632126	1925 bp distal
Rr632127	regulatory region 632127	1913 bp proximal
Sftpb	surfactant associated protein B	Intron
Tssr57080	transcription start site region 57080	1932 bp downstream
Tssr57081	transcription start site region 57081	1910 bp downstream
Tssr57082	transcription start site region 57082	1508 bp downstream
Tssr57083	transcription start site region 57083	1467 bp downstream
Tssr57084	transcription start site region 57084	895 bp downstream
Tssr57085	transcription start site region 57085	658 bp downstream
Tssr57086	transcription start site region 57086	613 bp downstream
Tssr57087	transcription start site region 57087	578 bp downstream
Tssr57088	transcription start site region 57088	526 bp downstream
Tssr57089	transcription start site region 57089	226 bp upstream
Tssr57090	transcription start site region 57090	279 bp upstream
Tssr57091	transcription start site region 57091	353 bp upstream
Tssr57092	transcription start site region 57092	583 bp upstream