rs253441784 SNP Detail

Summary

• ID
  rs253441784
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101568195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTATATG GCTTGAAATT
  CTAATTCTTT GTCTCATTAC TGCTCACACA TCAGAGGGCT TGGCTGCCCT TTAGCTATAG
  CTCACAACCA TACCTGCAGC TGGCCCTTGT GTCAATCATA AATTGTCTTC AGGACCTCCA
  CATATGCCAA GATCTGTGGC TATTCAAGTT TCTTACAGAA AATAGCCAAA CGTTTGCATT
  K
  TAACCTAGGT ACTTTCTCCC ATATACTGCA AGTCCTTGTC GATAAGTGAT AATACCTAGT
  AAAATATAAA GAGTTGTGTC ATGAAGGGAT CATGACAAGA AAATACCAAC ACATATTCAA
  AAACACACAA TTGAAAAATA TTGTTAATCT GTTGCTGGTA GGACCTGCGG ATGGGTGTAG
  GCAAACAGCA CTCAGCAGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231112	CHEV_4_101383603	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253441784					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101568195 () rs orientation: forward

Symbol	Name	Function Class
Rr376927	regulatory region 376927	1229 bp downstream
Rr596204	regulatory region 596204	321 bp distal