rs253384063 SNP Detail

Summary

• ID
  rs253384063
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143744099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGAGGTGA TCGTCCTGTC
  TTAACCTCCC TGGTGCCTGT AAGCTATTTG TGTAACCTGA CATAGAAAGA CAAGTACCAC
  ATCACTTACT TCATGTGTGG ATTATAAAAA TCATGGATTC GATGGGAATA GAAGATGGAA
  TAGTGGCTAG CAGAGGAGGG AGGGAGAACA GGAGGGGGAA TGCAGGGAGA CTGGTTCTAC
  R
  TGTAAAGCCA CAGCTGGACG TGAGGAGTAA GCTCTCAAGT GCAATTGGAC ACAAGGGTGA
  ATAGAATCCA GTGTTCCACT GTGCACTTCA AAATACCTAG GACTGGCTAT GTTCTCACCA
  TTAAAGAAAC TATGGGTGGT GGGTAAGCCA AATATCCTGA TTTCATCATT ACACCATAAA
  TAAACTCATG GCTTGTTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320535015	CHEV_2_143727915	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253384063					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143744099 () rs orientation: forward

Symbol	Name	Function Class
Rr566330	regulatory region 566330	1964 bp distal
Rr566331	regulatory region 566331	807 bp distal
Rr566332	regulatory region 566332	1278 bp proximal