rs253254872 SNP Detail

Summary

• ID
  rs253254872
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74792881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATATTTGTG GTGATCTGAG GAAATGGCTC
  CCACCTCGGG CAGTGATCAG CCCTGGTCAC TCTCTGAGGC CAGCTGGCAG CTCTTCCCCC
  ATGCCATCTC TGCAACAGGA GAAGGCTCAA TGAGTGGGTG AGAGCACGGT GGGAAGAAGC
  A
  ATAAACTGGG GGTGAGAGGG GGGAGGAGAG GAGGAAGGAA GGGGCTAACC TACTCCCCTG
  CTGTTGTCCA GAGCCTGGTC CATCTGAGCC TCCCCATTAC CATTTCCTTG TTCCCTGAGT
  CTGTCAAGGG CAGACTTTAT AGCTTCCTCT                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320348833	CHEV_2_74800594	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253254872					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74792881 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	1731 bp proximal
Rr559414	regulatory region 559414	1997 bp proximal