rs253254415 SNP Detail

Summary

• ID
  rs253254415
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107557385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTCTGTC TTGCCCAATG
  AGGGCTGTGT GCATATGTGT GCACATACAT CTAGAGGCCA GAGGCCGACA CTACACGCCT
  ATCCTATCAT TCTCCAGAGC ATTGTTTTGG GTCAGGGTCT CTCAATACAC CCATTCAGTA
  GACAGGCTAG ACAGCAAGCT CCAGGAATCC TGTCCTGCAG ACACGTGGGT GCTGGGATTT
  K
  AACTCAGGGC CTCGTGCTTA TATGGCATGT ACTTTACTGA CTGTGCCACC TCCCCACCCC
  CCAGGGCCTT TAATTTAGGA ATCAATACAC CATCACCTGC CCTAGAACTA GAGATATTTA
  CCTATTAGAA GATGCCAACT AGGACACTCT AATGAAACTC CTTTGCACCC TGAAATCTCA
  TATGTAATGA TGCTATTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250136	CHEV_4_107372793	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253254415					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107557385 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm70287	predicted gene, 70287	within coordinates
Rr597043	regulatory region 597043	938 bp proximal
Rr597044	regulatory region 597044	1118 bp proximal