rs253148080 SNP Detail

Summary

• ID
  rs253148080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115671848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATAGCAA GTATTTTTAT
  CCTGGGCCTT GCCTAGAATA GCGACGCCTA TTTACTGGGA GGGCGGAGAC TGCGGTTGGT
  TTCAGGCTGG ATCTGGGGGG GCCCTGTGGA TGAGCGCAGG AGGATCCTCT GCCTCCTAGG
  GACCGGCCAC AAGCTTGCAA CTACTTTCAC CTTTTCTCAC AAATGAATAA GACCCTGGTT
  R
  TCCTATATCC CACATTTTGG AAGGTCCTGG ACCCGCTGGC CTTATCCCAA GCTTAGCTTC
  CGTGCTACGC ACCTCAGCTG CCTCGACCAG AGCTGAGAAT GCAGGTATCC ACTGCTACTG
  CTCCTACGCT CCTACGAGGT GGCAACCCTC CTCCCTCGAC CCGCGAGTGC TGGACTCACA
  AGCACGAACC TACATAGCCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916383	CHEV_6_115644905	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253148080					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115671848 () rs orientation: forward

Symbol	Name	Function Class
Rr637022	regulatory region 637022	1946 bp distal
Rr637023	regulatory region 637023	1772 bp distal
Rr637024	regulatory region 637024	1281 bp distal
Rr637025	regulatory region 637025	within coordinates