CAGTAGGCTT ACTCACTTCG GTCTGACACT CATCATTTCC CACACTGAGC TTTGTCCCAG GGAACCTGGT CTTAGGAAGG CCCTCCAGAG TGGAAATGGG GTCCTGGTTA TCTGCAACCC CGGCCTGGAA AATGTTTGAA TAATAAATAA ATGTTTATAC ATTTATAATA TATAAATAAT AAATTAATAA ATAAATTAAT A AATTAATGTG GGAGTGTAGC TGGCATCTCC TCAGAGTTGC ACAGAAATAT ATGAGGAACA CAAGGATGGG TTGCTGGCCC TGGGCCTGGG CAACTGTGGA AATGTCTAGT AGGCTACCTA AAACGGAAGC CTCACTCTTG TGCGGGTTTC GGTTTATACG TCCATGGAGA TGGACTTTCA TGACTCTGTT AGTCATTACC A = A Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss325701885 | CHEV_18_77742155 | CHEVERUD | SCREENING_POP | f | SNP | A | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs253134310 | SNP | A | A |
Location: Chr18:77591112 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ark2c | arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Cpgi10275 | CpG island 10275 | 870 bp distal | ||||||
Rr541132 | regulatory region 541132 | 816 bp distal | ||||||
Rr541133 | regulatory region 541133 | 1523 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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