rs253128125 SNP Detail

Summary

• ID
  rs253128125
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98890508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGACGCA TACTGAGCGC
  TGTGCTCCGG ATGTACCTCT ATCACTCCCA AGCTCAGAGT CTCAAGTTAG AAAGCCTAAA
  GTCCACACAG TAAATCATGG GGCAGGATAG AAGACCCATT TTTTCCTCTT TTCACAGCAA
  AGAAAAGAAA TTCTAGGCTA AAGCTTAACC AGTAATGTTG CCAATGGCTG CAAAGGGGCA
  Y
  GTACTATCAT CACTAGAGAT GTGTGATTGC TTGTACAGCA AACAGGTAAG CAGTTTCCAA
  AGCTCAATAA TTAACAAACT AAGTGGAGAC TCAGCTATCC CTCACAAACA CCACTATCAC
  CAACATTATA CAAAAGACAA GAAACGACTT AAGGCTTTAA TATTCAGAAA GCTTAAGTTA
  TTTTACTGGT CATGAAGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222473	CHEV_4_98668962	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253128125					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98890508 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dock7	dedicator of cytokinesis 7			Intron
				Noncoding-Transcript-Variant
Rr595814	regulatory region 595814			1611 bp distal