rs253110192 SNP Detail

Summary

• ID
  rs253110192
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54458342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGGTAC CAGCCATATG
  GCACATATAG TATGGAATAG AGTTTATTTA GGGCATGGGG AGGGAAGGTA AGGAGGGAGT
  AGAGACAGAG AACAGCAGAC AGAGAGAGAA AGGGGAGGGG GAGAGGGAGA GGGAGAGAGG
  GAGAAGGAGA GGGAGGAGAG GGAGAGAGAT GGGATGGGGA GAAAGGGCAG GGAGAGAAGG
  R
  ATAGAGAGTA AGAGAGCAAG GAGAGCCCAA ACAGCCCCTT TTATAGTAAG CTAGGCATTA
  CCTGGCTGTT GCAAGGTAAC TGTGGGGCAG AGGCTAGAAG GAATGCTAAC ACATATTGTA
  TGGTTCCTGG GAAAAGAGGG GAGGAGAGAG GCAGTGACCA TGAGGAGTAC AAAATGAGAC
  CTCGGGATAC TAATAAAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771840	CHEV_3_54354843	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253110192					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54458342 () rs orientation: forward

Symbol	Name	Function Class
Rr576802	regulatory region 576802	984 bp proximal