rs253050079 SNP Detail

Summary

• ID
  rs253050079
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84392647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCTGCAG AGATCAGAAG
  AGGGCATCAG ATTCTCCGGG AGTAGAGCCA TAGGCAGTTG TGAGCTACCT TATAGGTCCT
  GGCAATCAAC CCTGGGTCCT CTGCAACAGT GACAGTGCTC TTAACAGCTA GTCATCTCTC
  CAGAGCCCTT ATTGATATAG ATGACTGGGG ATTTTCAAGG TTTTCAGCAG TGGGCAGGTT
  Y
  CAGAGGCAAT ATGGAGGACA TCTTGGGCTA TAAGTAGCCG TGACTTACTA GTAAGTCTCA
  GAAAATCATG ACACGCTGTC CAAGGACTAT AACTTCTGTG ATATCATCCC TGCTTCATCA
  AACACCATAG CTGTAGCTAA TGCTAAGCCA AATGCTCTTG TTTATTGGAA TACAGCAGGA
  GGGGAGGAGG GAGGGAAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321844896	CHEV_6_84365659	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253050079					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84392647 () rs orientation: forward

Symbol	Name	Function Class
Gm10445	predicted gene 10445	within coordinates
Rr633049	regulatory region 633049	864 bp distal