rs253024702 SNP Detail

Summary

• ID
  rs253024702
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129995790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCCCTCGCA AGAGACTCTC CTTCCTTCTG
  TCCTGTTCCC ATGGTGCCAG GGCCCAGACA CCTCTGTGTG CTGTTCTCAT TTACAGTGGG
  CTCTACaaaa aacaaaaaca aaaaacaaaa aaacaaaaaa acaaaaacaa aacaaaaaaa
  M
  CCTGCAACCT TCCTTCTAGT CCACAGAATC CAAAAGAGAA TCCAAACTTC AAACCTGGAC
  CTAGTTGGAA TCAAAGAGAA CTCCATAATG AGGTGGGTGT TGGTGTTCCT TCCTTCCCCA
  TATTGCCACA CGGGAGCTTG GCTCCTAGCC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321317063	CHEV_4_129779241	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs253024702					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129995790 () rs orientation: forward

Symbol	Name	Function Class
Rr600438	regulatory region 600438	289 bp distal
Rr600439	regulatory region 600439	71 bp proximal
Rr600440	regulatory region 600440	572 bp proximal
Rr600441	regulatory region 600441	1823 bp proximal