rs252956991 SNP Detail

Summary

• ID
  rs252956991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153567100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGGCACT ATCTTGCTGC
  CAGTTCAATG GGGGACACAA TGATGTCAGT GGCTCTTGTA GAGCAGACGT ACTGGAGGGA
  GGGATAGAGA ACACAGAGAG TGATTGTATA TTCAAGGTTG GGGAGGTGGC ATTGGAAATT
  AGGGTGGGGA AAGGAGAGGC CTCATCCAAC GGAAGTAAAG AAGTAGCCAT TTCAGGCAGA
  R
  GAGAGGACTT TGGGATAGAT GGTAGGTGGG CATCCCTAGA CCAGCTTGGA GCTCAGTGTT
  ATTAGGTGAA GAATGGCTTG GAAAGAGAGA CACAAGTATT TCTGACTGAA TGGTGCAGGC
  CTATGCATGG TGCCAGTTAG TTATACATGG GCACAGGGCA TTCCAAGAGA TTAGTTGCTT
  GAATTAATTG AAGTTAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320564627	CHEV_2_153550916	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252956991					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153567100 () rs orientation: forward

Symbol	Name	Function Class
Dnmt3c	DNA methyltransferase 3C	Intron
Gm74761	predicted gene, 74761	912 bp downstream
Rr567732	regulatory region 567732	1722 bp distal
Rr567733	regulatory region 567733	352 bp distal