rs252838531 SNP Detail

Summary

• ID
  rs252838531
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75639213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGCTTCTG GTTGCAGCTC
  AGGTCATCCA TATCTGCATA GCCTTCAGTG GTAACACAAG CCATAGAAAT CAACCCAGTC
  CCCTGTAGGG CATGGCTTGA AGGAGCATAG GCGGTCATGG ACTGGCTAGC TTGCCTGGCT
  GGCTACTGAC TTTTGCGCCT CCTGTGCAAC TGCTCAGATC AGGTTCCCCT CTCCCCCCCC
  A
  CCCCCCCCGC ATCACCCCTC CCTCAGTCCA CGTTTCCTCC CAGATTCCTC CCTCCATTCC
  CACTTGTGAT TGCTTCCTTT TCTTTCCCAA GTGGGACTGA GGTGTCCTTA CTTGGATACT
  TCAGCTTGTT GACCTTTTTC TCTTTTGAGT TCTGTGGACT CTATCTTGGG TATGCTGCAC
  TTTTTTTTTT TTTTTTTTTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	C57BL/6J	FVB/NJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	SEA/GnJ	SM/J	SWR/J
ss358485153	MGP_WTSI_3_75535828	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	C57BL/6J	FVB/NJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	SEA/GnJ	SM/J	SWR/J
rs252838531					SNP	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss358485153	MGP_WTSI_3_75535828	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75639213 () rs orientation: forward

Symbol	Name	Function Class
Rr578361	regulatory region 578361	336 bp distal