rs252738131 SNP Detail

Summary

• ID
  rs252738131
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:96573497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGGGT GACTTTGTGG
  AAGTTATGTT ATCACTTTCC ACCTAATATT TTGAAATAGG AACTGCCACT GATCTATTTG
  CCTGACTAGC TCCCAGTAAG GCCCAGGAAC TCGCCTGTCT CCATCCTTCC AATGCTGGGT
  TTACAGGTGC ATACCACTAC ATCTGGCTTT TATGTGGGTG CTGGAGATCC AAACTCGTGT
  Y
  CTTGTGTTTA TGTAGTGTGC ACTTTACCAA CAGAGCCACA TCCCCAGTCC TGCAATACTA
  TTATTATCAA ATTCTTTCAA TGTCCCAGGG AGAGTCTAGT ATACCATTGG TGCAAATAAA
  TCTCCCTTGG AAACTATTGA TTTAAAGAAA CAAAATTCTC CAGGCTTCAG AGGTTCAGAT
  GTTTCTACTC TGCCTCTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321216760	CHEV_4_96351951	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252738131					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:96573497 () rs orientation: forward

Symbol	Name	Function Class
Rr595521	regulatory region 595521	1472 bp distal
Rr595522	regulatory region 595522	1559 bp distal