rs252711878 SNP Detail

Summary

• ID
  rs252711878
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138110513 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAACTGC AAAACCTGTA
  TCGTGTGCTG GGGGGGGGGC GTTGTGGCGC GGAGAGCGGG GACAGGCTGT AATATCAACT
  GTGTAGGCGT GTGCGTGTTG CGGTATGGCA GAATGGGACA TCAGCCTTGG CTGGGGGTAG
  GGCACTCACT TTTTCTTATA TATTTGCTAT TTCTCTTTTT TCATGATCTT GGGAGAGGAA
  Y
  TTAATGATAT TTAATAGATC TCTAAGGAGT CTAACATCTA GGGCTGCATC CTGTCAGACA
  GATACTTAAC CTCTACCGGG GCCTTGGCTG CTCCCTAGGT GTGGTGCCCA TGGCTGAACT
  GTTTAAGGCA GATTTCCCAG GACTCACCAC CATCTACGCC TAAGTGGGAA GAATTGGGTG
  GTCAGCCAAT GGGATGAGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372981	CHEV_4_137939117	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252711878					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138110513 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	531 bp distal
Rr602904	regulatory region 602904	518 bp proximal