rs252704173 SNP Detail

Summary

• ID
  rs252704173
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141154155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTGTGTG ATCTACTTCA
  AAATTACCTG AAAATCCTGA AGGGCTAGTA ACAGAATATT TATCTAAAAT CTAAAAGAAA
  GAACACCTTC ATATCTTCTC CACTTCCTCC TTTCCCCCTT TCTTTGTTTT CTCACTCTGT
  GTATGTCTGT CTTTATTCCC AAAGATGCAT ACTCACAAAA CCCAAATACT TATACAACCC
  R
  TTAACTACTT TGTTGTGCAG AACAGATAAT CTCGAAAAAA ATTAACCACA AAATCCTATT
  TTTCTGCTGT TAACCAAGTA GTATTTGTTC CAGCTACTCA GGCACATTCT TGAGAATAGA
  AGATAGCTAC TGTCTAAGAC TGCCGTGGAT TCTAGCTTGT TTCTAATCTC CTTAGTTCTC
  TTTCTTTACT TTTCCATCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320992226	CHEV_3_141111358	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252704173					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141154155 () rs orientation: forward

Symbol	Name	Function Class
Gm66152	predicted gene, 66152	within coordinates
Tssr32030	transcription start site region 32030	801 bp upstream