rs252647347 SNP Detail

Summary

• ID
  rs252647347
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108696853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTCTCAG AACATAACTG
  CATTAACTAT GACTTGACGA TACCTGACAA GTATCATTAC CCCACCCCCG AATTTAGAAT
  CGCACACTGC TGGGCTGCTG AAATGGCTAA GAAAAGGCAC CTTCTGCCAA GCTTGACAAC
  CCCAGCTGGA ATCCATATGG CACAGACAGC TGATTCCCAC AAGCGGTACT CTGACCTTTC
  Y
  CAACACCAGC CACCCCCAGC CCCAATAAAA AATAATTAGC TGAAAATGTA AAACAGTACA
  CTTTGTGCTG TGCTGGAAAG ATGGCTCAGC AGTTAAAGAC TGCTTTTCCA GAGGACCTGG
  GTTCAATTTC CAACACACAC ACGGGAGCCC ACAACTGTCT GTAAGTCCTG TTCCAGAGAA
  GCCAACTCTC TCTGGCCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866894	CHEV_3_108592455	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252647347					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108696853 () rs orientation: forward

Symbol	Name	Function Class
Rr583314	regulatory region 583314	1242 bp distal
Rr583315	regulatory region 583315	within coordinates
Rr583316	regulatory region 583316	1764 bp proximal