rs252643050 SNP Detail

Summary

• ID
  rs252643050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124035355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATTTCCCA TAGGATCTCT
  GTATCAAGAT AGGTTTTTAT TATATCCTAA AACAAGTTGC CTGCATTCAC TTTAGATATA
  AAGCAATACT GAGCACACCC ATATCATCAG GCAGTTCACA ATGCGAGCAA AGACATCTGT
  TAATGGTACC ATGAATAGTT ATGAACTGAG GTGCACAAAT GGCTTTGCCA GGAAAGCATC
  R
  CCTCCTAATT TATTTTTATA GCAAATGGAA GCCTCATTTT TCATGGTTGG GTAGTTTGCA
  TTCAAATGTA CCAATAACTT CAAATGCAAT CACTTCTACC CAGCATGTTT TATTGAAGAG
  TACAGGACAG AATCACTAGT GGTCTGTTAA TAAGAAACAT CTTGTTCATC AGCAGTTTTT
  CTCATCCATT ATTTTCCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926576	CHEV_3_123944624	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252643050					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124035355 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	within coordinates