rs252570943 SNP Detail

Summary

• ID
  rs252570943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107600530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTGAGAG ATCATGGCTC
  AGAGAAACGA GTTCATTATG TTCAAGGTCT CACACAGCGA GCTGGTGACA TCGCTGGGAC
  TCTATCTGCA ACCGCTTCTT GCAGGTGTCA ACTCTTCTCT GATTTGTTGG TCTAACAGAT
  GCTTATCCAG CCTTCTTTTT TCATAGGAAA ACCAAGGGAC CAAGGTGGCT GGGGCAGGCT
  R
  AACAAGCCAG TCCTGAACAT GACTAACCCC TGAGTGGTCC AGGAACTTGT CAAGCCAGAG
  CCTTGCAAAG GCTAACGTTC CATTCTGAAG GTCTCTGCTG TTTCCACAAC CACATTAACC
  CTGCAAGTCC AGAGCCCATT TCCTGCCCAA AAGAACCAGC TAGTTCTTCA GTGAGCTCCA
  CCATCATGTT ACTAACCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250711	CHEV_4_107415938	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252570943					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107600530 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Rr597057	regulatory region 597057	1929 bp distal
Rr597058	regulatory region 597058	1775 bp proximal