rs252557081 SNP Detail

Summary

• ID
  rs252557081
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135667859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctcacttg gtaccatgct tgcttggata
  cacagagccc ttggttcagt tcctggcact gcataaacca agtgtggtat gcatgcctgt
  gatccaacag gatccgaagc tagtccggcc tgtctatata gtgagctcaa ggctgcccta
  R
  gctgtataga ctgtcCAGAG GAAGGGAAGG AGGAGAGAGC TAGCTTGTTT GGTCTCTTTA
  ATGCAGAACA CTGTGTGTGG TCCCTGGGGC TTCTCTCTCA TTCTGGTGTC TGTCTTTGAC
  AACTACCAGC TCAACCTGTG CTTCACTGTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353542	CHEV_4_135496463	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252557081					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135667859 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	248 bp downstream
Rr602205	regulatory region 602205	1412 bp distal
Rr602206	regulatory region 602206	1378 bp distal
Rr602207	regulatory region 602207	675 bp proximal
Rr602208	regulatory region 602208	1424 bp proximal