rs252541267 SNP Detail

Summary

• ID
  rs252541267
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52748301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAAAAGTT AAGTTGAATT GCCCATTACC
  ATGGAGATGG CTTCCTGTTT ACCACACTGG TCGCCCAGCT GTTGAAGACC AGCCACCCAG
  CCAATGAAAA GACAGCTTTT AGCTTCCCTT ATTCCATTAG TGCTTCAAAT AGTGAGTCAA
  W
  ACAACCTGTA ATTTACTAGT CGGTAAAATT TGATAAATTG TGTTTTCATA TATATTAGTG
  GTTTTACGTT TAACAAAGTC CATCATATGG AATTACCACT ATGGTTAAAA ACATTATTTT
  ATATTTTGAG AGGTAGGGGC TTCCCTGTGC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765411	CHEV_3_52644802	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252541267					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52748301 () rs orientation: forward

Symbol	Name	Function Class
Gm65956	predicted gene, 65956	488 bp upstream
Gm65967	predicted gene, 65967	297 bp downstream
Rr576589	regulatory region 576589	499 bp distal
Rr576590	regulatory region 576590	within coordinates