rs252290963 SNP Detail

Summary

• ID
  rs252290963
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:6821087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGTGCACAT GTTCTCAGAA
  GGTTGAAACA GGGGATCAGA TGCCTGGAGC CGGAGCTTTA GGTGGTATAA GCCACTGGAT
  GTGGGCAATG GGAACCAAAC TCAGATCTGC ACAGGCTGTA AACGCTGCTG ACTACTGAGC
  AAGACCCTTT CTCTGCTACA TGCAAACAAA ACATAATCCA TCATACTCAT TATGAGGTGA
  K
  GATGGTGGGA CTGACCTTGG TAAACAGTGA TTTGATTCAA ATAAAGAATG TGGTTGAGAA
  GAAACAAGAC CCAAAAGTCT TAAAGAAAAC AAAGGTGAGG CCCTGTGAGC TGACCAGAAC
  CTCAGCTGTA CCCACAAATT ACCTTAAGTC TGCCACAGAA AATGAGATGA TTCTGCTAGC
  GGTACACACA GATTTAAGGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320211970	CHEV_2_6737322	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252290963					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:6821087 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Celf2	CUGBP, Elav-like family member 2			Intron
				Noncoding-Transcript-Variant
Rr372727	regulatory region 372727			1551 bp upstream