rs252284136 SNP Detail

Summary

• ID
  rs252284136
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52785556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAACGAAA TCCAGACAGC
  GAGTTTTGAT AAGCATCCGC CCTACACCTT TCTCTCCCTA GGAAAATATA TTAGAAAGAA
  GTGTGTTTCC CTGCATCCCA GAATGCAGAG TCCAGAAGAG ACCAGGATAA CCACAGGGAG
  GGAGGAGGGG GATGAGCTCC AGCGGGTGTG GGGATCGGCT ACAGTGTTTG TGGGCTGCTG
  Y
  TTAAACTGCA GGAAATATTG TAACTGCGAA GAATTAACTT GTATGAATAA AGCAGTGAGT
  TCTCTCCACC CCACCCCACC CCACCCCGCC CTCCAAATGT TTAAGTCTTC CTACACAGGT
  GCACACGGGT ATATGCACAC ATATAATCTC CTGTGTGGGC ACACAGTAAA AGCACACCTG
  AAGATTGGAC ATTCCCATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765649	CHEV_3_52682057	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252284136					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52785556 () rs orientation: forward

Symbol	Name	Function Class
Rr576595	regulatory region 576595	within coordinates
Rr576596	regulatory region 576596	1601 bp proximal