rs252213092 SNP Detail

Summary

• ID
  rs252213092
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101531371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACACACCC TTCCCCCCAC AGCATTTACT
  CTCCTGGCCA AGCCCTTTGG GGAAGGATTC TCATCTGGGT CCACAGTGAG CGATCAACAC
  TCAGATTTTT TTCCTTTTGA GTCCAGCAAC CCACTGGTTA CAATTTCCAT TTTGCTATCT
  Y
  Gtgtgtaatt acttcctcta gattgaaaac attcactcct ggaggggtgc tcccatagac
  ctaagaagaa aacacaactc acaaatctca gaaagttcct gaaaatttca agattcatgc
  tcccctaccc tcaagactat ataagcagta                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321230909	CHEV_4_101346779	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252213092					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101531371 () rs orientation: forward

Symbol	Name	Function Class
Rr596196	regulatory region 596196	590 bp proximal
Rr596197	regulatory region 596197	1493 bp proximal