rs252201765 SNP Detail

Summary

• ID
  rs252201765
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82960644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGC GATAGCAAGA AAAGGCTGCT
  Y
  CTCTGCTTCT GTTGAGACCA ACCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320820920	CHEV_3_82857259	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252201765					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82960644 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13295	CpG island 13295	1708 bp proximal
Rr397732	regulatory region 397732	1912 bp upstream
Rr578826	regulatory region 578826	161 bp proximal
Rr578827	regulatory region 578827	560 bp proximal
Rr578828	regulatory region 578828	1695 bp proximal