rs252140933 SNP Detail

Summary

• ID
  rs252140933
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111536517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGTTTT CTAGAAATTA
  GATTGTCTTT GAATCATTTT GTTTGTTTTT TAAAATCAGG AAATAAGATT CCATGGATGG
  GAAAAAAATG TTGCAGAAAT TTTACTATCT AGCATCTCCA ATTGTAAAAT CAATGCAAAC
  AAATCTCAAA AAAGAAAAGA TAAATGGAAA ACAGGTTGTT AGGGCTGGAG GGGCGACTCA
  Y
  TGGTTAAGGG TATGCCCAGC TCTTACAGAG GATCTGAGTT CAGTTCTCAG CATCACAAAG
  GCAGAACACC ACTGCTTGAA TCTGTAGCTC TTGGGAGATC TGGCGCCCCC TTCTGGCCTC
  CATGGGCACT TCACAAACGT GCACATAGCC ATCACTCATA TGCATAATTA GTAAGAATTA
  AGGCTGCAAT TAAATATGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321905998	CHEV_6_111509550	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252140933					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111536517 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	within coordinates
Rr636272	regulatory region 636272	100 bp proximal