rs252097925 SNP Detail

Summary

• ID
  rs252097925
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:12752293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTATATGA TGATATGTAC
  ACTCATAAAT ATATCTATAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT
  CTATCTCTAT ATATTAGGAA AGAAGCATAT AAAGTACTTT TCATGAATGG GATAATGAAT
  CTCTGTGATT AGAATCTATA TGTTAAGGCA ATTATAAAAA TTATTTATTT GATGGAAAAG
  A
  ATTTATTTTA ATATAATTTT ATTAATGTAA TTAAGTGATT CAATAGGGAA AATTATTTTT
  GATAAAATAT TATATAGAGG AATATATAAA ATGCTTATTC TGAAATAAAA ATATTAGCTG
  TATTTCTCCA CATAATAGCA ACTTAATTTC AACAACAACC AAAACTCAAA GGAATTCTAT
  TTATGCATCC TCTAGGTGTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321745452	CHEV_6_12702294	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252097925					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:12752293 () rs orientation: forward

Symbol	Name	Function Class
Rr626541	regulatory region 626541	1131 bp distal
Rr626542	regulatory region 626542	185 bp proximal